|PDB||The protein structure database of atom coordinates.|
Free structure viewing program for Macintosh, UNIX and PC |
computers. Extremely powerful and very highly recommended. Can be
linked to web viewer programs as a plugin.
|SwissPdbViewer|| Free structure viewing program for Macintosh and UNIX computers. |
Particularly useful for overlaying structures.
| FSSP: Families of structurally |
| Database of structural alignments of proteins in the Protein Data Bank. |
FSSP contains an extended structural family for each of 330
representative protein chains. Comparisons are based only on 3D
coordinates and derived using objective structural comparison
| HSSP: Homology derived |
secondary structures of
| HSSP bases structural comparisons on sequence information as well |
as 2D and 3D structural information Alignment statistics are generated
for each protein of known structure.
| JoY: Protein Structure and |
| JoY annotates sequence alignments with structural information |
including secondary structure, solvent accessibility and hydrogen
| Cambridge Database of |
Organized as Structural
| Database of protein alignments categorized into superfamilies and |
annotated to display secondary structure, solvent accessibility and
hydrogen bonding patterns.
| Library of Protein Family |
| List of average core structures computed from structural assignments |
of protein family sequences.
| NIH Guide to Molecular |
| Provides links to fundamental model building information and |
| Swiss-Model: Automated |
Protein modeling server at the GLAXO Institute for Molecular Biology in
| Image Library of Biological |
| PICT images of amino acids, nucleotides, RNA, DNA, proteins and |
| PSDB: Protein Structure |
| Java-based display relates tertiary and secondary structure derived |
from PDB and NRL3D to primary sequence.
|Swiss-3DImage|| Protein image database with links to mono and stereo GIF/JPEG/SGI |
images as well as images for interactive viewing using RasMol.